IStats

IStats

namespace ft

Copyright (c) 2018, Wasserman lab

FILE ikmergenerator.h

DESCRIPTION This file contains the declaration of kmergenerator interface

class IStats
#include <istats.h>

Copyright (c) 2019, Wasserman lab.

Author
Godfrain Jacques Kounkou This file contains the declaration of stats.h, it contains all functions necessary to generate some stats or related stats contents

Subclassed by ft::Stats

Public Functions

virtual void ft::IStats::printKmerCountToFile(const fs::path & outputFile, std::map< std::string, uint > & counter) const= 0

printKmerCountToFile

Parameters
  • outputFile:
  • counter:

virtual void ft::IStats::printKmerSearchTimeToFile(const fs::path & outputFile, const std::string & kmer, uint time) const= 0

Stats::printKmerSearchTimeToFile.

Parameters
  • outputFile:
  • kmer:
  • time:

virtual void ft::IStats::printMatchingReadsToFile(const fs::path & outputFile, const std::string & read, ReaIDsMap & line) const= 0

printMatchingReadsToFile

Parameters
  • outputFile:
  • read: