QueryExtractor¶
QueryExtractor¶
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namespace
ft¶ Copyright (c) 2018, Wasserman lab
FILE ikmergenerator.h
DESCRIPTION This file contains the declaration of kmergenerator interface
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class
QueryExtractor¶ - #include <queryextractor.h>
This file contains the declaration of queryextractor class.
- Copyright
- Copyright (c) 2019, Wasserman lab
- Author
- Godfrain Jacques Kounkou
Public Functions
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QueryExtractor::QueryExtractor()¶
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ft::QueryExtractor::~
QueryExtractor()¶ ~QueryExtractor
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void
QueryExtractor::getInputQueriesRoutine(const std::string & refSequence, const std::string & altSequence, uint fileIndex, std::set< Query > & inputQueries)¶ getInputQueriesRoutine
- Parameters
refSequence:altSequence:fileIndex:inputQueries:
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void
QueryExtractor::getStartAndEndPointSequences(const std::string & startPointRef, const std::string & endPointRef, uint fileIndex, std::set< Query > & inputQueries)¶ getStartAndEndPointSequences
- Parameters
startPointRef:endPointRef:fileIndex:inputQueries:
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std::set< Query >
QueryExtractor::getInputQueries(bool refOnly, bool crossover, const fs::path & pathToQueryFile)¶ getInputQueries
- Return
- Parameters
refOnly:crossover:pathToQueryFile:
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void
QueryExtractor::overrideUtils(std::shared_ptr< IUtils > utils)¶ overrideUtils
- Parameters
utils:
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class